MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Chlamydia trachomatis Ia/SotonIa1 plasmid pSotonIa1

Total Repeats: 19

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020962	TGG	2	6	12	17	0 %	33.33 %	66.67 %	0 %	Non-Coding
2	NC_020962	TGG	2	6	34	39	0 %	33.33 %	66.67 %	0 %	Non-Coding
3	NC_020962	TGG	2	6	56	61	0 %	33.33 %	66.67 %	0 %	Non-Coding
4	NC_020962	TGG	2	6	78	83	0 %	33.33 %	66.67 %	0 %	Non-Coding
5	NC_020962	A	6	6	111	116	100 %	0 %	0 %	0 %	Non-Coding
6	NC_020962	A	6	6	1117	1122	100 %	0 %	0 %	0 %	Non-Coding
7	NC_020962	GTA	2	6	2136	2141	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
8	NC_020962	ATT	2	6	2165	2170	33.33 %	66.67 %	0 %	0 %	Non-Coding
9	NC_020962	GTT	2	6	2182	2187	0 %	66.67 %	33.33 %	0 %	Non-Coding
10	NC_020962	T	7	7	2209	2215	0 %	100 %	0 %	0 %	Non-Coding
11	NC_020962	ATTA	2	8	4629	4636	50 %	50 %	0 %	0 %	Non-Coding
12	NC_020962	ATTT	2	8	4663	4670	25 %	75 %	0 %	0 %	Non-Coding
13	NC_020962	A	6	6	4683	4688	100 %	0 %	0 %	0 %	Non-Coding
14	NC_020962	TCC	2	6	7434	7439	0 %	33.33 %	0 %	66.67 %	Non-Coding
15	NC_020962	AT	5	10	7448	7457	50 %	50 %	0 %	0 %	Non-Coding
16	NC_020962	TAT	2	6	7459	7464	33.33 %	66.67 %	0 %	0 %	Non-Coding
17	NC_020962	AT	6	12	7463	7474	50 %	50 %	0 %	0 %	Non-Coding
18	NC_020962	GATTT	2	10	7480	7489	20 %	60 %	20 %	0 %	Non-Coding
19	NC_020962	GA	3	6	7493	7498	50 %	0 %	50 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.